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22MOBT - Selected bioanalytical techniques

Course specification
Course titleSelected bioanalytical techniques
Acronym22MOBT
Study programmeBiochemical Engineering and Biotechnology
Module
Lecturer (for classes)
Lecturer/Associate (for practice)
    Lecturer/Associate (for OTC)
      ESPB4.0Status
      ConditionОблик условљености
      The goalThe main goal is to enable students to use the most important methods and techniques for identification, quantification and characterization of biomolecules. The most relevant methods for quantitative determination of biomolecules, used as substrates of biotechnological processes or being products of the same, such as proteins, carbohydrates, lipids, nucleic acids and vitamins.
      The outcomeStudents will learn chromatographic and spectroscopic methods applied in quantitative analysis of biomolecules, as well as electrophoretic methods of biomolecules characterization. During the laboratory work these methods will be applied for determination of concentration in commercial products or in following the course of particular bioprocesses, such as enzymatic reactions, fermentations and enzyme immobilizations.
      Contents
      Contents of lecturesChromatography of biomolecules. Plate theory of chromatography. van Deemter equation. Detectors and elution regimes. Ion exchange chromatography. Affinity chromatography. Gel permeation chromatography. Reversed-phase chromatography. Hydrophobic interaction chromatography. Quantitation assays of biomolecules. Protein quantitation assays. Carbohydrate quantitation assays. Nucleic acid quantitation assays. Lipid quantitation assays. Vitamin quantitation assays. Electrophoretic characterization of biomolecules. Electrophoretic support media. Detection of proteins and nucleic acids after electrophoretic separation. Zone electrophoresis. Isoelectric focusing. Validation of new bioanalytical methods. Statistical analysis. Precision and accuracy. Limits of quantitation and detection.
      Contents of exercisesSpectroscopic assays for total sugars and reducing sugars. Determination of mono-, di- and trisaccharide concentration using high pressure liquid chromatography (HPLC) system equppied with sugar columns (amino-functionalyzed columns or columns with immobilized metal counterions for formation of chelate complexes with sugars) and refractive index detector. Determination of hydrosoluble and liposoluble vitamins using reversed phase HPLC in pharmaceuticals and nutraceuticals. Colorimetric protein assays. Monitoring the course of enzyme-catalyzed protein hydrolysis with ninhydrin assay and reversed-phase HPLC. Validation of bioanalytical method for determination of enzymatic activity. Statistical analysis of accuracy and precision (LOD and LOQ, recovery test, inter-laboratory precission).
      Literature
      1. Mikkelsen S. R., Corton E, Bioanalytical chemistry, Wiley-Interscience, 2004.
      2. Snyder L. R., Kirkland J.J., Dolan J.W., Introduction to Modern Liquid Chromatography, John Wiley & Sons, 3rd Ed., 2010.
      3. Aguilar M.I.,HPLC of peptides and proteins, Methods and protocols, vol. 251, Humana Press, 2004.
      4. Kromidas S., Practical problem solving in HPLC, Wiley-VCH, 2000.
      Number of hours per week during the semester/trimester/year
      LecturesExercisesOTCStudy and ResearchOther classes
      12
      Methods of teachingTheoretical lectures. Laboratory practice.
      Knowledge score (maximum points 100)
      Pre obligationsPointsFinal examPoints
      Activites during lecturesTest paper
      Practical lessons40Oral examination60
      Projects
      Colloquia
      Seminars